Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Gm7638-201ENSMUST00000121348 967 ntBASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cul4aQ3TCH7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Gm38027-201ENSMUST00000192315 235 ntBASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Cul4aQ3TCH7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.65■□□□□ 0.42
Cul4aQ3TCH7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.64■□□□□ 0.42
Cul4aQ3TCH7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Cul4aQ3TCH7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cul4aQ3TCH7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Gm12085-201ENSMUST00000119263 940 ntBASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cul4aQ3TCH7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cul4aQ3TCH7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms