Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Chd8Q09XV5 Gm44430-201ENSMUST00000203376 995 ntBASIC15.03■□□□□ -0
Chd8Q09XV5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Chd8Q09XV5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd8Q09XV5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd8Q09XV5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chd8Q09XV5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd8Q09XV5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.03■□□□□ -0
Chd8Q09XV5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.03■□□□□ -0
Chd8Q09XV5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd8Q09XV5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd8Q09XV5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd8Q09XV5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.03■□□□□ -0
Chd8Q09XV5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd8Q09XV5 Golph3-205ENSMUST00000228671 2842 ntBASIC15.02■□□□□ -0
Chd8Q09XV5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd8Q09XV5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd8Q09XV5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chd8Q09XV5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chd8Q09XV5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd8Q09XV5 Gm12497-201ENSMUST00000138778 237 ntBASIC15.02■□□□□ -0
Chd8Q09XV5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd8Q09XV5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chd8Q09XV5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chd8Q09XV5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Chd8Q09XV5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd8Q09XV5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.02□□□□□ -0.01
Chd8Q09XV5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.02□□□□□ -0.01
Chd8Q09XV5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chd8Q09XV5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.02□□□□□ -0.01
Chd8Q09XV5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.02□□□□□ -0.01
Chd8Q09XV5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd8Q09XV5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.02□□□□□ -0.01
Chd8Q09XV5 Gm25948-201ENSMUST00000175334 112 ntBASIC15.02□□□□□ -0.01
Chd8Q09XV5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.02□□□□□ -0.01
Chd8Q09XV5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd8Q09XV5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.02□□□□□ -0.01
Chd8Q09XV5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd8Q09XV5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd8Q09XV5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd8Q09XV5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd8Q09XV5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.02□□□□□ -0.01
Chd8Q09XV5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.01□□□□□ -0.01
Chd8Q09XV5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Chd8Q09XV5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chd8Q09XV5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Gm13186-201ENSMUST00000118031 316 ntBASIC15□□□□□ -0.01
Chd8Q09XV5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Chd8Q09XV5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15□□□□□ -0.01
Chd8Q09XV5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15□□□□□ -0.01
Chd8Q09XV5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15□□□□□ -0.01
Chd8Q09XV5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15□□□□□ -0.01
Chd8Q09XV5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chd8Q09XV5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15□□□□□ -0.01
Chd8Q09XV5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15□□□□□ -0.01
Chd8Q09XV5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Mir6990-201ENSMUST00000183724 91 ntBASIC15□□□□□ -0.01
Chd8Q09XV5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd8Q09XV5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chd8Q09XV5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.99□□□□□ -0.01
Chd8Q09XV5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.99□□□□□ -0.01
Chd8Q09XV5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.99□□□□□ -0.01
Chd8Q09XV5 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.99□□□□□ -0.01
Chd8Q09XV5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms