Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.39□□□□□ -0.43
Hspg2Q05793 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.39□□□□□ -0.43
Hspg2Q05793 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.39□□□□□ -0.43
Hspg2Q05793 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.39□□□□□ -0.43
Hspg2Q05793 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Hspg2Q05793 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Gm29791-202ENSMUST00000207888 369 ntBASIC12.39□□□□□ -0.43
Hspg2Q05793 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.39□□□□□ -0.43
Hspg2Q05793 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Hspg2Q05793 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hspg2Q05793 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hspg2Q05793 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.38□□□□□ -0.43
Hspg2Q05793 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.38□□□□□ -0.43
Hspg2Q05793 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Gm26308-201ENSMUST00000157768 69 ntBASIC12.38□□□□□ -0.43
Hspg2Q05793 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hspg2Q05793 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.38□□□□□ -0.43
Hspg2Q05793 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.38□□□□□ -0.43
Hspg2Q05793 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Hspg2Q05793 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.38□□□□□ -0.43
Hspg2Q05793 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.38□□□□□ -0.43
Hspg2Q05793 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hspg2Q05793 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hspg2Q05793 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hspg2Q05793 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hspg2Q05793 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hspg2Q05793 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hspg2Q05793 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Gm18421-201ENSMUST00000204122 625 ntBASIC12.37□□□□□ -0.43
Hspg2Q05793 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.37□□□□□ -0.43
Hspg2Q05793 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.37□□□□□ -0.43
Hspg2Q05793 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hspg2Q05793 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hspg2Q05793 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.36□□□□□ -0.43
Hspg2Q05793 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hspg2Q05793 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.36□□□□□ -0.43
Hspg2Q05793 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.36□□□□□ -0.43
Hspg2Q05793 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hspg2Q05793 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.36□□□□□ -0.43
Hspg2Q05793 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.36□□□□□ -0.43
Hspg2Q05793 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hspg2Q05793 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hspg2Q05793 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hspg2Q05793 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms