Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim43bP86448 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43bP86448 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim43bP86448 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.28■□□□□ 0.36
Trim43bP86448 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Trim43bP86448 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim43bP86448 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43bP86448 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43bP86448 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43bP86448 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43bP86448 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43bP86448 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim43bP86448 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43bP86448 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.27■□□□□ 0.36
Trim43bP86448 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim43bP86448 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim43bP86448 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim43bP86448 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim43bP86448 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43bP86448 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.27■□□□□ 0.36
Trim43bP86448 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43bP86448 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43bP86448 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43bP86448 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43bP86448 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43bP86448 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43bP86448 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Trim43bP86448 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43bP86448 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43bP86448 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43bP86448 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43bP86448 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43bP86448 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim43bP86448 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim43bP86448 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim43bP86448 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.26■□□□□ 0.35
Trim43bP86448 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim43bP86448 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43bP86448 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43bP86448 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.25■□□□□ 0.35
Trim43bP86448 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43bP86448 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43bP86448 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43bP86448 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim43bP86448 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim43bP86448 Gm11643-201ENSMUST00000119578 864 ntBASIC17.25■□□□□ 0.35
Trim43bP86448 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Trim43bP86448 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim43bP86448 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim43bP86448 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43bP86448 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43bP86448 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43bP86448 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43bP86448 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Trim43bP86448 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Gm12382-201ENSMUST00000122005 922 ntBASIC17.24■□□□□ 0.35
Trim43bP86448 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms