Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.68■□□□□ 0.26
Shox2P70390 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Shox2P70390 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.68■□□□□ 0.26
Shox2P70390 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Gm11643-201ENSMUST00000119578 864 ntBASIC16.68■□□□□ 0.26
Shox2P70390 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.68■□□□□ 0.26
Shox2P70390 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Shox2P70390 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Shox2P70390 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shox2P70390 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Shox2P70390 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Shox2P70390 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.67■□□□□ 0.26
Shox2P70390 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Shox2P70390 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.67■□□□□ 0.26
Shox2P70390 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Shox2P70390 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shox2P70390 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.67■□□□□ 0.26
Shox2P70390 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.66■□□□□ 0.26
Shox2P70390 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Gm2399-201ENSMUST00000104944 225 ntBASIC16.66■□□□□ 0.26
Shox2P70390 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Shox2P70390 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Shox2P70390 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.66■□□□□ 0.26
Shox2P70390 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Shox2P70390 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.66■□□□□ 0.26
Shox2P70390 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shox2P70390 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.65■□□□□ 0.26
Shox2P70390 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.65■□□□□ 0.26
Shox2P70390 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Shox2P70390 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.65■□□□□ 0.26
Shox2P70390 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Shox2P70390 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Shox2P70390 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Shox2P70390 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.65■□□□□ 0.26
Shox2P70390 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.65■□□□□ 0.26
Shox2P70390 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Shox2P70390 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Shox2P70390 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shox2P70390 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.65■□□□□ 0.26
Shox2P70390 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Shox2P70390 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Shox2P70390 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shox2P70390 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shox2P70390 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shox2P70390 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shox2P70390 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shox2P70390 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shox2P70390 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shox2P70390 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.64■□□□□ 0.25
Shox2P70390 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.64■□□□□ 0.25
Shox2P70390 Gm43017-201ENSMUST00000198296 752 ntBASIC16.64■□□□□ 0.25
Shox2P70390 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.64■□□□□ 0.25
Shox2P70390 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms