Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Hmgb1P63158 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Hmgb1P63158 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Gm13168-201ENSMUST00000121771 632 ntBASIC18.47■□□□□ 0.55
Hmgb1P63158 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Hmgb1P63158 Gm27000-201ENSMUST00000182943 842 ntBASIC18.47■□□□□ 0.55
Hmgb1P63158 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.47■□□□□ 0.55
Hmgb1P63158 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Hmgb1P63158 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Hmgb1P63158 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgb1P63158 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.46■□□□□ 0.55
Hmgb1P63158 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb1P63158 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb1P63158 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb1P63158 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb1P63158 Mir1199-201ENSMUST00000117015 119 ntBASIC18.46■□□□□ 0.55
Hmgb1P63158 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb1P63158 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb1P63158 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgb1P63158 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Hmgb1P63158 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.46■□□□□ 0.54
Hmgb1P63158 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Hmgb1P63158 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.45■□□□□ 0.54
Hmgb1P63158 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hmgb1P63158 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Hmgb1P63158 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.45■□□□□ 0.54
Hmgb1P63158 Gm29257-201ENSMUST00000186115 639 ntBASIC18.45■□□□□ 0.54
Hmgb1P63158 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.45■□□□□ 0.54
Hmgb1P63158 Timm23-208ENSMUST00000226683 750 ntBASIC18.45■□□□□ 0.54
Hmgb1P63158 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hmgb1P63158 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hmgb1P63158 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.45■□□□□ 0.54
Hmgb1P63158 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgb1P63158 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hmgb1P63158 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hmgb1P63158 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.44■□□□□ 0.54
Hmgb1P63158 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.44■□□□□ 0.54
Hmgb1P63158 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hmgb1P63158 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.44■□□□□ 0.54
Hmgb1P63158 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.44■□□□□ 0.54
Hmgb1P63158 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.44■□□□□ 0.54
Hmgb1P63158 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hmgb1P63158 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgb1P63158 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hmgb1P63158 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.43■□□□□ 0.54
Hmgb1P63158 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hmgb1P63158 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.43■□□□□ 0.54
Hmgb1P63158 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hmgb1P63158 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgb1P63158 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms