Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lhx1P63006 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Lhx1P63006 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.54■□□□□ 0.24
Lhx1P63006 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Lhx1P63006 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.53■□□□□ 0.24
Lhx1P63006 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lhx1P63006 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Rarb-207ENSMUST00000225921 2756 ntBASIC16.53■□□□□ 0.24
Lhx1P63006 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Gm21362-201ENSMUST00000194272 928 ntBASIC16.53■□□□□ 0.24
Lhx1P63006 Gm17808-201ENSMUST00000200859 894 ntBASIC16.53■□□□□ 0.24
Lhx1P63006 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Gm7367-201ENSMUST00000057611 492 ntBASIC16.53■□□□□ 0.24
Lhx1P63006 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.53■□□□□ 0.24
Lhx1P63006 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.53■□□□□ 0.24
Lhx1P63006 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx1P63006 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lhx1P63006 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lhx1P63006 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.52■□□□□ 0.24
Lhx1P63006 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lhx1P63006 Gm14859-201ENSMUST00000117752 357 ntBASIC16.52■□□□□ 0.24
Lhx1P63006 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lhx1P63006 Gm11950-201ENSMUST00000121615 838 ntBASIC16.52■□□□□ 0.24
Lhx1P63006 Gm6623-201ENSMUST00000173570 544 ntBASIC16.52■□□□□ 0.24
Lhx1P63006 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lhx1P63006 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lhx1P63006 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lhx1P63006 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Lhx1P63006 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Lhx1P63006 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lhx1P63006 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lhx1P63006 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Lhx1P63006 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lhx1P63006 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lhx1P63006 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.51■□□□□ 0.23
Lhx1P63006 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lhx1P63006 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.51■□□□□ 0.23
Lhx1P63006 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Mir770-201ENSMUST00000103252 94 ntBASIC16.51■□□□□ 0.23
Lhx1P63006 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.51■□□□□ 0.23
Lhx1P63006 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lhx1P63006 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lhx1P63006 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx1P63006 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Lhx1P63006 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.5■□□□□ 0.23
Lhx1P63006 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lhx1P63006 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lhx1P63006 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Lhx1P63006 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.5■□□□□ 0.23
Lhx1P63006 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.5■□□□□ 0.23
Lhx1P63006 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.5■□□□□ 0.23
Lhx1P63006 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx1P63006 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms