Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp46P62069 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp46P62069 Gm37722-201ENSMUST00000193757 208 ntBASIC17.58■□□□□ 0.4
Usp46P62069 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Usp46P62069 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Usp46P62069 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp46P62069 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Usp46P62069 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Usp46P62069 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp46P62069 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Usp46P62069 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.57■□□□□ 0.4
Usp46P62069 Gm7284-201ENSMUST00000131667 944 ntBASIC17.57■□□□□ 0.4
Usp46P62069 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Gm17808-201ENSMUST00000200859 894 ntBASIC17.57■□□□□ 0.4
Usp46P62069 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Usp46P62069 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.57■□□□□ 0.4
Usp46P62069 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.57■□□□□ 0.4
Usp46P62069 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Usp46P62069 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Usp46P62069 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp46P62069 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Usp46P62069 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.56■□□□□ 0.4
Usp46P62069 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Usp46P62069 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Usp46P62069 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp46P62069 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp46P62069 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp46P62069 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.55■□□□□ 0.4
Usp46P62069 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp46P62069 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp46P62069 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp46P62069 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp46P62069 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp46P62069 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp46P62069 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp46P62069 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Usp46P62069 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp46P62069 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp46P62069 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp46P62069 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp46P62069 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp46P62069 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp46P62069 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp46P62069 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp46P62069 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp46P62069 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp46P62069 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp46P62069 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms