Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrch1P62046 Gm15590-201ENSMUST00000078419 552 ntBASIC19.8■□□□□ 0.76
Lrch1P62046 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lrch1P62046 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrch1P62046 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrch1P62046 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lrch1P62046 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.79■□□□□ 0.76
Lrch1P62046 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Lrch1P62046 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.79■□□□□ 0.76
Lrch1P62046 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.79■□□□□ 0.76
Lrch1P62046 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Lrch1P62046 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.79■□□□□ 0.76
Lrch1P62046 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrch1P62046 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.78■□□□□ 0.76
Lrch1P62046 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Gm15173-201ENSMUST00000122049 433 ntBASIC19.78■□□□□ 0.76
Lrch1P62046 Gm14822-201ENSMUST00000122247 291 ntBASIC19.78■□□□□ 0.76
Lrch1P62046 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Gm9727-201ENSMUST00000161387 555 ntBASIC19.78■□□□□ 0.76
Lrch1P62046 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Auts2-212ENSMUST00000178555 309 ntBASIC19.78■□□□□ 0.76
Lrch1P62046 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.78■□□□□ 0.76
Lrch1P62046 Gm10576-201ENSMUST00000191927 825 ntBASIC19.78■□□□□ 0.76
Lrch1P62046 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.78■□□□□ 0.76
Lrch1P62046 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrch1P62046 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Lrch1P62046 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.77■□□□□ 0.76
Lrch1P62046 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lrch1P62046 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lrch1P62046 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lrch1P62046 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lrch1P62046 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Lrch1P62046 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrch1P62046 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrch1P62046 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Lrch1P62046 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrch1P62046 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrch1P62046 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lrch1P62046 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrch1P62046 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrch1P62046 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Lrch1P62046 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lrch1P62046 Gm25745-201ENSMUST00000174945 133 ntBASIC19.76■□□□□ 0.75
Lrch1P62046 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Lrch1P62046 AV026068-213ENSMUST00000223675 1171 ntBASIC19.76■□□□□ 0.75
Lrch1P62046 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrch1P62046 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lrch1P62046 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Lrch1P62046 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.75■□□□□ 0.75
Lrch1P62046 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.75■□□□□ 0.75
Lrch1P62046 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.75■□□□□ 0.75
Lrch1P62046 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.75■□□□□ 0.75
Lrch1P62046 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lrch1P62046 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.75■□□□□ 0.75
Lrch1P62046 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.74■□□□□ 0.75
Lrch1P62046 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.74■□□□□ 0.75
Lrch1P62046 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms