Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Gm5921-201ENSMUST00000075898 882 ntBASIC13.24□□□□□ -0.29
Ctdsp1P58466 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctdsp1P58466 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Ctdsp1P58466 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Gm27801-201ENSMUST00000184174 223 ntBASIC13.23□□□□□ -0.29
Ctdsp1P58466 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.23□□□□□ -0.29
Ctdsp1P58466 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctdsp1P58466 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.23□□□□□ -0.29
Ctdsp1P58466 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.22□□□□□ -0.29
Ctdsp1P58466 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctdsp1P58466 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Asic1-205ENSMUST00000228185 1818 ntBASIC13.21□□□□□ -0.29
Ctdsp1P58466 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Gm7417-201ENSMUST00000192950 473 ntBASIC13.21□□□□□ -0.29
Ctdsp1P58466 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ctdsp1P58466 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdsp1P58466 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdsp1P58466 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdsp1P58466 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdsp1P58466 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdsp1P58466 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdsp1P58466 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdsp1P58466 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Ctdsp1P58466 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdsp1P58466 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdsp1P58466 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ctdsp1P58466 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdsp1P58466 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdsp1P58466 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdsp1P58466 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms