Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cdh11P55288 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh11P55288 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh11P55288 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh11P55288 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh11P55288 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh11P55288 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.33■□□□□ 0.05
Cdh11P55288 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh11P55288 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh11P55288 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh11P55288 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh11P55288 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cdh11P55288 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Cdh11P55288 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Cdh11P55288 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.33■□□□□ 0.04
Cdh11P55288 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdh11P55288 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.33■□□□□ 0.04
Cdh11P55288 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cdh11P55288 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh11P55288 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Cdh11P55288 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh11P55288 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh11P55288 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh11P55288 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Cdh11P55288 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh11P55288 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh11P55288 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Cdh11P55288 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cdh11P55288 Gm12382-201ENSMUST00000122005 922 ntBASIC15.32■□□□□ 0.04
Cdh11P55288 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.32■□□□□ 0.04
Cdh11P55288 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cdh11P55288 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdh11P55288 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdh11P55288 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh11P55288 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cdh11P55288 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdh11P55288 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdh11P55288 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cdh11P55288 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cdh11P55288 Gm10418-201ENSMUST00000100943 576 ntBASIC15.31■□□□□ 0.04
Cdh11P55288 Gm13836-201ENSMUST00000121159 501 ntBASIC15.31■□□□□ 0.04
Cdh11P55288 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.31■□□□□ 0.04
Cdh11P55288 Mir5122-201ENSMUST00000175004 89 ntBASIC15.31■□□□□ 0.04
Cdh11P55288 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdh11P55288 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdh11P55288 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.31■□□□□ 0.04
Cdh11P55288 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.31■□□□□ 0.04
Cdh11P55288 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdh11P55288 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdh11P55288 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdh11P55288 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh11P55288 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdh11P55288 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cdh11P55288 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdh11P55288 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cdh11P55288 Gm15565-201ENSMUST00000118890 427 ntBASIC15.3■□□□□ 0.04
Cdh11P55288 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.3■□□□□ 0.04
Cdh11P55288 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.3■□□□□ 0.04
Cdh11P55288 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdh11P55288 Mir6349-201ENSMUST00000184059 97 ntBASIC15.3■□□□□ 0.04
Cdh11P55288 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdh11P55288 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms