Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Abcd3P55096 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Abcd3P55096 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Abcd3P55096 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Abcd3P55096 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.03■□□□□ -0
Abcd3P55096 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.03■□□□□ -0
Abcd3P55096 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.03■□□□□ -0
Abcd3P55096 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Abcd3P55096 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.03■□□□□ -0
Abcd3P55096 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Abcd3P55096 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.03■□□□□ -0
Abcd3P55096 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Abcd3P55096 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd3P55096 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Abcd3P55096 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.02■□□□□ -0
Abcd3P55096 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Abcd3P55096 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.02■□□□□ -0
Abcd3P55096 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.02■□□□□ -0
Abcd3P55096 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Abcd3P55096 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Abcd3P55096 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.02■□□□□ -0
Abcd3P55096 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.02■□□□□ -0
Abcd3P55096 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.02■□□□□ -0
Abcd3P55096 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd3P55096 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.02■□□□□ -0
Abcd3P55096 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd3P55096 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd3P55096 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd3P55096 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Abcd3P55096 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd3P55096 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd3P55096 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Abcd3P55096 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd3P55096 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.01□□□□□ -0.01
Abcd3P55096 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.01□□□□□ -0.01
Abcd3P55096 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.01□□□□□ -0.01
Abcd3P55096 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Abcd3P55096 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Abcd3P55096 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Abcd3P55096 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Abcd3P55096 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Abcd3P55096 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.01□□□□□ -0.01
Abcd3P55096 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd3P55096 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15□□□□□ -0.01
Abcd3P55096 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Abcd3P55096 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Abcd3P55096 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Abcd3P55096 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15□□□□□ -0.01
Abcd3P55096 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abcd3P55096 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Abcd3P55096 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abcd3P55096 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abcd3P55096 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abcd3P55096 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15□□□□□ -0.01
Abcd3P55096 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15□□□□□ -0.01
Abcd3P55096 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15□□□□□ -0.01
Abcd3P55096 Gm5417-201ENSMUST00000079706 384 ntBASIC15□□□□□ -0.01
Abcd3P55096 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abcd3P55096 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Abcd3P55096 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms