Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacnb3P54285 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Cacnb3P54285 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
Cacnb3P54285 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacnb3P54285 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.58■□□□□ 0.72
Cacnb3P54285 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cacnb3P54285 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cacnb3P54285 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Cacnb3P54285 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.57■□□□□ 0.72
Cacnb3P54285 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.57■□□□□ 0.72
Cacnb3P54285 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.57■□□□□ 0.72
Cacnb3P54285 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cacnb3P54285 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cacnb3P54285 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacnb3P54285 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cacnb3P54285 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacnb3P54285 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.56■□□□□ 0.72
Cacnb3P54285 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.56■□□□□ 0.72
Cacnb3P54285 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cacnb3P54285 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cacnb3P54285 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.56■□□□□ 0.72
Cacnb3P54285 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cacnb3P54285 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.56■□□□□ 0.72
Cacnb3P54285 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.55■□□□□ 0.72
Cacnb3P54285 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cacnb3P54285 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.55■□□□□ 0.72
Cacnb3P54285 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.55■□□□□ 0.72
Cacnb3P54285 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.55■□□□□ 0.72
Cacnb3P54285 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.55■□□□□ 0.72
Cacnb3P54285 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.55■□□□□ 0.72
Cacnb3P54285 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cacnb3P54285 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.54■□□□□ 0.72
Cacnb3P54285 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.54■□□□□ 0.72
Cacnb3P54285 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.54■□□□□ 0.72
Cacnb3P54285 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.54■□□□□ 0.72
Cacnb3P54285 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cacnb3P54285 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Gm13312-201ENSMUST00000119631 718 ntBASIC19.53■□□□□ 0.72
Cacnb3P54285 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.53■□□□□ 0.72
Cacnb3P54285 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Cacnb3P54285 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.53■□□□□ 0.72
Cacnb3P54285 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cacnb3P54285 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.53■□□□□ 0.72
Cacnb3P54285 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Cacnb3P54285 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cacnb3P54285 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Cacnb3P54285 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Cacnb3P54285 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cacnb3P54285 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb3P54285 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Cacnb3P54285 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb3P54285 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.52■□□□□ 0.72
Cacnb3P54285 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb3P54285 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.52■□□□□ 0.72
Cacnb3P54285 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb3P54285 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb3P54285 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb3P54285 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cacnb3P54285 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms