Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.68■□□□□ 0.74
LtbrP50284 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.68■□□□□ 0.74
LtbrP50284 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.68■□□□□ 0.74
LtbrP50284 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.68■□□□□ 0.74
LtbrP50284 Gm5264-201ENSMUST00000190584 848 ntBASIC19.68■□□□□ 0.74
LtbrP50284 Gm6376-201ENSMUST00000209407 580 ntBASIC19.68■□□□□ 0.74
LtbrP50284 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.68■□□□□ 0.74
LtbrP50284 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LtbrP50284 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LtbrP50284 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LtbrP50284 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LtbrP50284 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LtbrP50284 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LtbrP50284 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LtbrP50284 Gm11779-201ENSMUST00000118541 368 ntBASIC19.67■□□□□ 0.74
LtbrP50284 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.67■□□□□ 0.74
LtbrP50284 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.67■□□□□ 0.74
LtbrP50284 Gm6296-201ENSMUST00000222599 943 ntBASIC19.67■□□□□ 0.74
LtbrP50284 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.67■□□□□ 0.74
LtbrP50284 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LtbrP50284 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LtbrP50284 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LtbrP50284 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LtbrP50284 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LtbrP50284 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.66■□□□□ 0.74
LtbrP50284 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.66■□□□□ 0.74
LtbrP50284 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.66■□□□□ 0.74
LtbrP50284 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.66■□□□□ 0.74
LtbrP50284 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
LtbrP50284 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.66■□□□□ 0.74
LtbrP50284 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.66■□□□□ 0.74
LtbrP50284 Gm6736-201ENSMUST00000166583 948 ntBASIC19.66■□□□□ 0.74
LtbrP50284 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.66■□□□□ 0.74
LtbrP50284 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LtbrP50284 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.66■□□□□ 0.74
LtbrP50284 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LtbrP50284 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LtbrP50284 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LtbrP50284 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LtbrP50284 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.65■□□□□ 0.74
LtbrP50284 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LtbrP50284 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LtbrP50284 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LtbrP50284 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LtbrP50284 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LtbrP50284 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LtbrP50284 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LtbrP50284 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LtbrP50284 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.65■□□□□ 0.74
LtbrP50284 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LtbrP50284 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LtbrP50284 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LtbrP50284 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LtbrP50284 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.64■□□□□ 0.73
LtbrP50284 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.64■□□□□ 0.73
LtbrP50284 Gm12350-201ENSMUST00000121208 462 ntBASIC19.64■□□□□ 0.73
LtbrP50284 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.64■□□□□ 0.73
LtbrP50284 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LtbrP50284 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.64■□□□□ 0.73
LtbrP50284 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LtbrP50284 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms