Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.26□□□□□ -0.13
Hist1h1dP43277 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1dP43277 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Gm12382-201ENSMUST00000122005 922 ntBASIC14.25□□□□□ -0.13
Hist1h1dP43277 Gm24841-201ENSMUST00000158676 357 ntBASIC14.25□□□□□ -0.13
Hist1h1dP43277 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hist1h1dP43277 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.24□□□□□ -0.13
Hist1h1dP43277 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Gm10517-202ENSMUST00000192970 758 ntBASIC14.24□□□□□ -0.13
Hist1h1dP43277 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.24□□□□□ -0.13
Hist1h1dP43277 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hist1h1dP43277 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hist1h1dP43277 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.23□□□□□ -0.13
Hist1h1dP43277 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hist1h1dP43277 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms