Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.33■□□□□ 0.37
Cxcl12P40224 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cxcl12P40224 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Cxcl12P40224 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.33■□□□□ 0.37
Cxcl12P40224 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.33■□□□□ 0.37
Cxcl12P40224 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Cxcl12P40224 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 Gm9727-201ENSMUST00000161387 555 ntBASIC17.33■□□□□ 0.36
Cxcl12P40224 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cxcl12P40224 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cxcl12P40224 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cxcl12P40224 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.32■□□□□ 0.36
Cxcl12P40224 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Cxcl12P40224 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.32■□□□□ 0.36
Cxcl12P40224 Auts2-212ENSMUST00000178555 309 ntBASIC17.32■□□□□ 0.36
Cxcl12P40224 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.32■□□□□ 0.36
Cxcl12P40224 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.32■□□□□ 0.36
Cxcl12P40224 AV026068-213ENSMUST00000223675 1171 ntBASIC17.32■□□□□ 0.36
Cxcl12P40224 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.32■□□□□ 0.36
Cxcl12P40224 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.32■□□□□ 0.36
Cxcl12P40224 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cxcl12P40224 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cxcl12P40224 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Gm26308-201ENSMUST00000157768 69 ntBASIC17.31■□□□□ 0.36
Cxcl12P40224 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Cxcl12P40224 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.31■□□□□ 0.36
Cxcl12P40224 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.31■□□□□ 0.36
Cxcl12P40224 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.31■□□□□ 0.36
Cxcl12P40224 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cxcl12P40224 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cxcl12P40224 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Gm4995-201ENSMUST00000117247 432 ntBASIC17.3■□□□□ 0.36
Cxcl12P40224 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.3■□□□□ 0.36
Cxcl12P40224 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.3■□□□□ 0.36
Cxcl12P40224 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.3■□□□□ 0.36
Cxcl12P40224 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.3■□□□□ 0.36
Cxcl12P40224 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cxcl12P40224 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.3■□□□□ 0.36
Cxcl12P40224 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.3■□□□□ 0.36
Cxcl12P40224 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.3■□□□□ 0.36
Cxcl12P40224 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.3■□□□□ 0.36
Cxcl12P40224 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.3■□□□□ 0.36
Cxcl12P40224 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cxcl12P40224 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cxcl12P40224 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
Cxcl12P40224 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 Gm7506-201ENSMUST00000207758 815 ntBASIC17.29■□□□□ 0.36
Cxcl12P40224 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.29■□□□□ 0.36
Cxcl12P40224 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.29■□□□□ 0.36
Cxcl12P40224 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cxcl12P40224 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms