Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp53P15975 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp53P15975 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp53P15975 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp53P15975 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp53P15975 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp53P15975 Gm18115-201ENSMUST00000221209 621 ntBASIC19.45■□□□□ 0.7
Usp53P15975 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.45■□□□□ 0.7
Usp53P15975 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp53P15975 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp53P15975 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp53P15975 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp53P15975 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp53P15975 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp53P15975 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.45■□□□□ 0.7
Usp53P15975 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp53P15975 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp53P15975 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp53P15975 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.44■□□□□ 0.7
Usp53P15975 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp53P15975 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.44■□□□□ 0.7
Usp53P15975 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.44■□□□□ 0.7
Usp53P15975 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp53P15975 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp53P15975 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.44■□□□□ 0.7
Usp53P15975 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp53P15975 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp53P15975 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp53P15975 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp53P15975 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.43■□□□□ 0.7
Usp53P15975 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp53P15975 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp53P15975 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp53P15975 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.42■□□□□ 0.7
Usp53P15975 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Gm9103-201ENSMUST00000119371 405 ntBASIC19.42■□□□□ 0.7
Usp53P15975 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.42■□□□□ 0.7
Usp53P15975 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.42■□□□□ 0.7
Usp53P15975 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp53P15975 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp53P15975 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp53P15975 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp53P15975 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp53P15975 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp53P15975 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp53P15975 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp53P15975 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp53P15975 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp53P15975 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Usp53P15975 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.41■□□□□ 0.7
Usp53P15975 Olfr129-201ENSMUST00000122318 993 ntBASIC19.41■□□□□ 0.7
Usp53P15975 Gm18421-201ENSMUST00000204122 625 ntBASIC19.41■□□□□ 0.7
Usp53P15975 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Usp53P15975 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp53P15975 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp53P15975 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Usp53P15975 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp53P15975 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp53P15975 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp53P15975 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp53P15975 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Usp53P15975 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp53P15975 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp53P15975 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp53P15975 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.4■□□□□ 0.7
Usp53P15975 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp53P15975 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp53P15975 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Usp53P15975 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.4■□□□□ 0.7
Usp53P15975 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.4■□□□□ 0.7
Usp53P15975 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp53P15975 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp53P15975 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp53P15975 Gm27742-201ENSMUST00000184667 60 ntBASIC19.4■□□□□ 0.7
Usp53P15975 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp53P15975 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp53P15975 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms