Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msx1P13297 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Msx1P13297 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msx1P13297 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Msx1P13297 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msx1P13297 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Msx1P13297 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Msx1P13297 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.92■□□□□ 0.14
Msx1P13297 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.92■□□□□ 0.14
Msx1P13297 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC15.92■□□□□ 0.14
Msx1P13297 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Msx1P13297 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.92■□□□□ 0.14
Msx1P13297 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Msx1P13297 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.92■□□□□ 0.14
Msx1P13297 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msx1P13297 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.91■□□□□ 0.14
Msx1P13297 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Msx1P13297 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Msx1P13297 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Msx1P13297 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.91■□□□□ 0.14
Msx1P13297 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.91■□□□□ 0.14
Msx1P13297 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Msx1P13297 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.91■□□□□ 0.14
Msx1P13297 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msx1P13297 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Msx1P13297 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Msx1P13297 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.9■□□□□ 0.14
Msx1P13297 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC15.9■□□□□ 0.14
Msx1P13297 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Msx1P13297 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msx1P13297 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Msx1P13297 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Msx1P13297 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Msx1P13297 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.89■□□□□ 0.13
Msx1P13297 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.89■□□□□ 0.13
Msx1P13297 Gm18958-201ENSMUST00000174258 762 ntBASIC15.89■□□□□ 0.13
Msx1P13297 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Msx1P13297 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Msx1P13297 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.89■□□□□ 0.13
Msx1P13297 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msx1P13297 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.89■□□□□ 0.13
Msx1P13297 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms