Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.39■□□□□ 0.37
CopeO89079 Gm13158-201ENSMUST00000122007 736 ntBASIC17.39■□□□□ 0.37
CopeO89079 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.39■□□□□ 0.37
CopeO89079 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CopeO89079 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.39■□□□□ 0.37
CopeO89079 Gm18025-201ENSMUST00000221733 862 ntBASIC17.39■□□□□ 0.37
CopeO89079 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CopeO89079 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CopeO89079 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CopeO89079 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CopeO89079 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CopeO89079 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.38■□□□□ 0.37
CopeO89079 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CopeO89079 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CopeO89079 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.38■□□□□ 0.37
CopeO89079 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CopeO89079 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CopeO89079 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CopeO89079 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CopeO89079 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CopeO89079 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Gm42545-201ENSMUST00000202755 922 ntBASIC17.37■□□□□ 0.37
CopeO89079 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CopeO89079 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.36■□□□□ 0.37
CopeO89079 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CopeO89079 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CopeO89079 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CopeO89079 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CopeO89079 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CopeO89079 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CopeO89079 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.36■□□□□ 0.37
CopeO89079 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CopeO89079 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.35■□□□□ 0.37
CopeO89079 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CopeO89079 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CopeO89079 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Gm12382-201ENSMUST00000122005 922 ntBASIC17.34■□□□□ 0.37
CopeO89079 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Dancr-204ENSMUST00000132389 2347 ntBASIC17.34■□□□□ 0.37
CopeO89079 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CopeO89079 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms