Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Mmp8O70138 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp8O70138 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Mmp8O70138 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Mmp8O70138 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Mmp8O70138 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Mmp8O70138 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp8O70138 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp8O70138 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp8O70138 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.5■□□□□ 0.87
Mmp8O70138 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp8O70138 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp8O70138 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp8O70138 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Mmp8O70138 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp8O70138 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.5■□□□□ 0.87
Mmp8O70138 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Mmp8O70138 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp8O70138 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.49■□□□□ 0.87
Mmp8O70138 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Mmp8O70138 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Mmp8O70138 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Mmp8O70138 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.49■□□□□ 0.87
Mmp8O70138 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.49■□□□□ 0.87
Mmp8O70138 Gm37722-201ENSMUST00000193757 208 ntBASIC20.49■□□□□ 0.87
Mmp8O70138 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Mmp8O70138 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp8O70138 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Mmp8O70138 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Mmp8O70138 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.48■□□□□ 0.87
Mmp8O70138 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp8O70138 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Mmp8O70138 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.47■□□□□ 0.87
Mmp8O70138 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Gm6659-201ENSMUST00000174752 547 ntBASIC20.47■□□□□ 0.87
Mmp8O70138 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Mmp8O70138 Gm18421-201ENSMUST00000204122 625 ntBASIC20.47■□□□□ 0.87
Mmp8O70138 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp8O70138 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Mmp8O70138 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Mmp8O70138 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.46■□□□□ 0.87
Mmp8O70138 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Gm11355-201ENSMUST00000121120 306 ntBASIC20.46■□□□□ 0.87
Mmp8O70138 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Mmp8O70138 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp8O70138 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms