Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Dio3-201ENSMUST00000097228 1449 ntBASIC15.28■□□□□ 0.04
Rnf13O54965 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Rnf13O54965 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.28■□□□□ 0.04
Rnf13O54965 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.28■□□□□ 0.04
Rnf13O54965 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rnf13O54965 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf13O54965 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rnf13O54965 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Rnf13O54965 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf13O54965 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rnf13O54965 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf13O54965 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Rnf13O54965 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf13O54965 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf13O54965 Dancr-204ENSMUST00000132389 2347 ntBASIC15.27■□□□□ 0.04
Rnf13O54965 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf13O54965 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.27■□□□□ 0.04
Rnf13O54965 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf13O54965 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf13O54965 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf13O54965 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf13O54965 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf13O54965 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf13O54965 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf13O54965 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf13O54965 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf13O54965 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf13O54965 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf13O54965 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf13O54965 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf13O54965 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf13O54965 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf13O54965 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf13O54965 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf13O54965 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.26■□□□□ 0.03
Rnf13O54965 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.26■□□□□ 0.03
Rnf13O54965 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf13O54965 Gm12896-201ENSMUST00000118430 226 ntBASIC15.26■□□□□ 0.03
Rnf13O54965 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.26■□□□□ 0.03
Rnf13O54965 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.26■□□□□ 0.03
Rnf13O54965 Gm10602-201ENSMUST00000098239 609 ntBASIC15.26■□□□□ 0.03
Rnf13O54965 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf13O54965 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf13O54965 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf13O54965 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf13O54965 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rnf13O54965 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Rnf13O54965 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf13O54965 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf13O54965 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rnf13O54965 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf13O54965 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.24■□□□□ 0.03
Rnf13O54965 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.24■□□□□ 0.03
Rnf13O54965 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.24■□□□□ 0.03
Rnf13O54965 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.24■□□□□ 0.03
Rnf13O54965 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Rnf13O54965 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf13O54965 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms