Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.78□□□□□ -0.04
Dkk1O54908 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.78□□□□□ -0.04
Dkk1O54908 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dkk1O54908 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dkk1O54908 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dkk1O54908 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Dkk1O54908 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dkk1O54908 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Dkk1O54908 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Dkk1O54908 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dkk1O54908 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Dkk1O54908 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dkk1O54908 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Dkk1O54908 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dkk1O54908 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dkk1O54908 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dkk1O54908 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.77□□□□□ -0.04
Dkk1O54908 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dkk1O54908 AC151904.4-201ENSMUST00000219868 1319 ntBASIC14.77□□□□□ -0.04
Dkk1O54908 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.77□□□□□ -0.05
Dkk1O54908 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC14.77□□□□□ -0.05
Dkk1O54908 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Dkk1O54908 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Dkk1O54908 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Dkk1O54908 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Dkk1O54908 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dkk1O54908 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Gm37234-201ENSMUST00000193259 1441 ntBASIC14.76□□□□□ -0.05
Dkk1O54908 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.76□□□□□ -0.05
Dkk1O54908 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Dkk1O54908 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.76□□□□□ -0.05
Dkk1O54908 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Dkk1O54908 Gm7791-201ENSMUST00000219066 539 ntBASIC14.76□□□□□ -0.05
Dkk1O54908 AC154441.1-201ENSMUST00000223653 1006 ntBASIC14.76□□□□□ -0.05
Dkk1O54908 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Dkk1O54908 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dkk1O54908 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.75□□□□□ -0.05
Dkk1O54908 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC14.75□□□□□ -0.05
Dkk1O54908 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC14.75□□□□□ -0.05
Dkk1O54908 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.75□□□□□ -0.05
Dkk1O54908 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Gm18387-201ENSMUST00000220333 702 ntBASIC14.75□□□□□ -0.05
Dkk1O54908 AC154848.1-201ENSMUST00000225451 846 ntBASIC14.75□□□□□ -0.05
Dkk1O54908 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Dkk1O54908 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Dkk1O54908 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Dkk1O54908 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC14.74□□□□□ -0.05
Dkk1O54908 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dkk1O54908 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms