Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.33□□□□□ -0.44
CrxO54751 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CrxO54751 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CrxO54751 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CrxO54751 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CrxO54751 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.33□□□□□ -0.44
CrxO54751 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CrxO54751 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CrxO54751 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CrxO54751 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CrxO54751 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CrxO54751 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CrxO54751 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CrxO54751 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
CrxO54751 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CrxO54751 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CrxO54751 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CrxO54751 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
CrxO54751 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.32□□□□□ -0.44
CrxO54751 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CrxO54751 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CrxO54751 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.32□□□□□ -0.44
CrxO54751 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CrxO54751 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.31□□□□□ -0.44
CrxO54751 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
CrxO54751 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CrxO54751 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Gm12251-201ENSMUST00000117893 792 ntBASIC12.31□□□□□ -0.44
CrxO54751 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CrxO54751 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.31□□□□□ -0.44
CrxO54751 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.31□□□□□ -0.44
CrxO54751 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CrxO54751 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.31□□□□□ -0.44
CrxO54751 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CrxO54751 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.31□□□□□ -0.44
CrxO54751 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CrxO54751 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.31□□□□□ -0.44
CrxO54751 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CrxO54751 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CrxO54751 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.3□□□□□ -0.44
CrxO54751 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CrxO54751 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CrxO54751 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.3□□□□□ -0.44
CrxO54751 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.3□□□□□ -0.44
CrxO54751 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.3□□□□□ -0.44
CrxO54751 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.3□□□□□ -0.44
CrxO54751 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CrxO54751 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms