Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccr6O54689 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccr6O54689 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccr6O54689 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccr6O54689 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccr6O54689 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccr6O54689 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Ccr6O54689 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccr6O54689 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccr6O54689 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.16□□□□□ -0.14
Ccr6O54689 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccr6O54689 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccr6O54689 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ccr6O54689 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccr6O54689 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccr6O54689 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccr6O54689 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.15□□□□□ -0.14
Ccr6O54689 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Ccr6O54689 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ccr6O54689 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ccr6O54689 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccr6O54689 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccr6O54689 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.15□□□□□ -0.14
Ccr6O54689 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.15□□□□□ -0.15
Ccr6O54689 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccr6O54689 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccr6O54689 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccr6O54689 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Ccr6O54689 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.14□□□□□ -0.15
Ccr6O54689 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccr6O54689 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.14□□□□□ -0.15
Ccr6O54689 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccr6O54689 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Ccr6O54689 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccr6O54689 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Ccr6O54689 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccr6O54689 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccr6O54689 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccr6O54689 Asic1-205ENSMUST00000228185 1818 ntBASIC14.13□□□□□ -0.15
Ccr6O54689 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccr6O54689 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccr6O54689 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccr6O54689 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ccr6O54689 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccr6O54689 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccr6O54689 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccr6O54689 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccr6O54689 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccr6O54689 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccr6O54689 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccr6O54689 Gm27454-201ENSMUST00000185090 204 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms