Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Gm28359-201ENSMUST00000187470 1322 ntBASIC16.34■□□□□ 0.21
Lhx8O35652 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx8O35652 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Lhx8O35652 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx8O35652 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx8O35652 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lhx8O35652 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx8O35652 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx8O35652 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx8O35652 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx8O35652 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx8O35652 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx8O35652 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx8O35652 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx8O35652 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx8O35652 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx8O35652 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.33■□□□□ 0.2
Lhx8O35652 Gm22032-201ENSMUST00000116946 116 ntBASIC16.33■□□□□ 0.2
Lhx8O35652 Gm37215-201ENSMUST00000194927 1259 ntBASIC16.33■□□□□ 0.2
Lhx8O35652 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC16.33■□□□□ 0.2
Lhx8O35652 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Lhx8O35652 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx8O35652 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Lhx8O35652 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lhx8O35652 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC16.32■□□□□ 0.2
Lhx8O35652 Gm22709-201ENSMUST00000116893 111 ntBASIC16.32■□□□□ 0.2
Lhx8O35652 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.32■□□□□ 0.2
Lhx8O35652 V1rg10-201ENSMUST00000183378 937 ntBASIC16.32■□□□□ 0.2
Lhx8O35652 Gm7889-201ENSMUST00000185591 958 ntBASIC16.32■□□□□ 0.2
Lhx8O35652 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lhx8O35652 Gm9931-201ENSMUST00000193584 1185 ntBASIC16.32■□□□□ 0.2
Lhx8O35652 Gm6443-201ENSMUST00000203599 874 ntBASIC16.32■□□□□ 0.2
Lhx8O35652 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lhx8O35652 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lhx8O35652 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lhx8O35652 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.32■□□□□ 0.2
Lhx8O35652 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx8O35652 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.31■□□□□ 0.2
Lhx8O35652 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Lhx8O35652 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lhx8O35652 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lhx8O35652 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.31■□□□□ 0.2
Lhx8O35652 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lhx8O35652 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lhx8O35652 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx8O35652 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx8O35652 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.3■□□□□ 0.2
Lhx8O35652 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lhx8O35652 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx8O35652 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lhx8O35652 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx8O35652 Mir669o-201ENSMUST00000103898 96 ntBASIC16.3■□□□□ 0.2
Lhx8O35652 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx8O35652 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx8O35652 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.3■□□□□ 0.2
Lhx8O35652 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx8O35652 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx8O35652 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.3■□□□□ 0.2
Lhx8O35652 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lhx8O35652 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lhx8O35652 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx8O35652 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms