Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Clk2O35491 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.3■□□□□ 0.52
Clk2O35491 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.3■□□□□ 0.52
Clk2O35491 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clk2O35491 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.29■□□□□ 0.52
Clk2O35491 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clk2O35491 Gm28033-201ENSMUST00000184224 96 ntBASIC18.29■□□□□ 0.52
Clk2O35491 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.29■□□□□ 0.52
Clk2O35491 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clk2O35491 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clk2O35491 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clk2O35491 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Clk2O35491 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clk2O35491 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clk2O35491 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.29■□□□□ 0.52
Clk2O35491 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clk2O35491 Mir3081-201ENSMUST00000175305 84 ntBASIC18.28■□□□□ 0.52
Clk2O35491 Gm18669-201ENSMUST00000216049 778 ntBASIC18.28■□□□□ 0.52
Clk2O35491 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clk2O35491 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clk2O35491 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clk2O35491 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clk2O35491 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.27■□□□□ 0.52
Clk2O35491 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.27■□□□□ 0.52
Clk2O35491 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.27■□□□□ 0.52
Clk2O35491 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clk2O35491 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clk2O35491 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Clk2O35491 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clk2O35491 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clk2O35491 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Clk2O35491 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Clk2O35491 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Clk2O35491 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Clk2O35491 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.26■□□□□ 0.51
Clk2O35491 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.26■□□□□ 0.51
Clk2O35491 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.26■□□□□ 0.51
Clk2O35491 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clk2O35491 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Clk2O35491 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clk2O35491 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Clk2O35491 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Clk2O35491 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clk2O35491 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clk2O35491 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clk2O35491 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.25■□□□□ 0.51
Clk2O35491 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clk2O35491 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Clk2O35491 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clk2O35491 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clk2O35491 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Clk2O35491 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clk2O35491 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clk2O35491 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.25■□□□□ 0.51
Clk2O35491 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clk2O35491 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.24■□□□□ 0.51
Clk2O35491 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Clk2O35491 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Clk2O35491 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Clk2O35491 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clk2O35491 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clk2O35491 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.24■□□□□ 0.51
Clk2O35491 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clk2O35491 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clk2O35491 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.24■□□□□ 0.51
Clk2O35491 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clk2O35491 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clk2O35491 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clk2O35491 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Clk2O35491 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.23■□□□□ 0.51
Clk2O35491 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms