Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ebf3O08791 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Mir3081-201ENSMUST00000175305 84 ntBASIC17.44■□□□□ 0.38
Ebf3O08791 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ebf3O08791 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ebf3O08791 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.43■□□□□ 0.38
Ebf3O08791 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ebf3O08791 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.43■□□□□ 0.38
Ebf3O08791 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ebf3O08791 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.42■□□□□ 0.38
Ebf3O08791 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Gm7153-201ENSMUST00000117092 455 ntBASIC17.42■□□□□ 0.38
Ebf3O08791 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Mir8112-201ENSMUST00000184382 131 ntBASIC17.42■□□□□ 0.38
Ebf3O08791 Gm27742-201ENSMUST00000184667 60 ntBASIC17.42■□□□□ 0.38
Ebf3O08791 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ebf3O08791 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.42■□□□□ 0.38
Ebf3O08791 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.42■□□□□ 0.38
Ebf3O08791 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.42■□□□□ 0.38
Ebf3O08791 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ebf3O08791 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.41■□□□□ 0.38
Ebf3O08791 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.41■□□□□ 0.38
Ebf3O08791 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Ebf3O08791 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ebf3O08791 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.41■□□□□ 0.38
Ebf3O08791 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.41■□□□□ 0.38
Ebf3O08791 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.41■□□□□ 0.38
Ebf3O08791 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ebf3O08791 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.41■□□□□ 0.38
Ebf3O08791 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ebf3O08791 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.4■□□□□ 0.38
Ebf3O08791 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Ebf3O08791 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ebf3O08791 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ebf3O08791 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ebf3O08791 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ebf3O08791 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.39■□□□□ 0.37
Ebf3O08791 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ebf3O08791 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms