Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Gm10602-201ENSMUST00000098239 609 ntBASIC16.16■□□□□ 0.18
Polr2jO08740 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Polr2jO08740 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Polr2jO08740 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Polr2jO08740 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.15■□□□□ 0.18
Polr2jO08740 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.15■□□□□ 0.18
Polr2jO08740 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.15■□□□□ 0.18
Polr2jO08740 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Polr2jO08740 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.15■□□□□ 0.18
Polr2jO08740 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Polr2jO08740 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Polr2jO08740 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Polr2jO08740 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Polr2jO08740 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.14■□□□□ 0.17
Polr2jO08740 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Gm27275-201ENSMUST00000184318 272 ntBASIC16.14■□□□□ 0.17
Polr2jO08740 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.14■□□□□ 0.17
Polr2jO08740 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Dancr-204ENSMUST00000132389 2347 ntBASIC16.14■□□□□ 0.17
Polr2jO08740 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Polr2jO08740 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.14■□□□□ 0.17
Polr2jO08740 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.14■□□□□ 0.17
Polr2jO08740 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Polr2jO08740 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Polr2jO08740 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Polr2jO08740 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.13■□□□□ 0.17
Polr2jO08740 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Polr2jO08740 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Polr2jO08740 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.13■□□□□ 0.17
Polr2jO08740 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.13■□□□□ 0.17
Polr2jO08740 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Polr2jO08740 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Polr2jO08740 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.12■□□□□ 0.17
Polr2jO08740 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Polr2jO08740 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Polr2jO08740 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Polr2jO08740 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Polr2jO08740 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.12■□□□□ 0.17
Polr2jO08740 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Polr2jO08740 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Polr2jO08740 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms