Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf11bO08712 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf11bO08712 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf11bO08712 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf11bO08712 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11bO08712 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11bO08712 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Timm23-208ENSMUST00000226683 750 ntBASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11bO08712 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf11bO08712 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Gm18958-201ENSMUST00000174258 762 ntBASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf11bO08712 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms