Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc180J3QNE4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc180J3QNE4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc180J3QNE4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc180J3QNE4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
Ccdc180J3QNE4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC30.56■■■□□ 2.48
Ccdc180J3QNE4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc180J3QNE4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc180J3QNE4 Gm1401-201ENSMUST00000122048 772 ntBASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC30.55■■■□□ 2.48
Ccdc180J3QNE4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 Gm43702-201ENSMUST00000198772 2546 ntBASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 Gm7507-201ENSMUST00000183053 1008 ntBASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 Gm5867-201ENSMUST00000063197 592 ntBASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc180J3QNE4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc180J3QNE4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc180J3QNE4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc180J3QNE4 AC160338.1-201ENSMUST00000214232 705 ntBASIC30.53■■■□□ 2.48
Ccdc180J3QNE4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc180J3QNE4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc180J3QNE4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Gm11779-201ENSMUST00000118541 368 ntBASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Gm37935-201ENSMUST00000192012 982 ntBASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Gm6376-201ENSMUST00000209407 580 ntBASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 AC107711.5-202ENSMUST00000226429 702 ntBASIC30.52■■■□□ 2.48
Ccdc180J3QNE4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Ccdc180J3QNE4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Ccdc180J3QNE4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC30.51■■■□□ 2.47
Ccdc180J3QNE4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC30.51■■■□□ 2.47
Ccdc180J3QNE4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
Ccdc180J3QNE4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
Ccdc180J3QNE4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC30.51■■■□□ 2.47
Ccdc180J3QNE4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Ccdc180J3QNE4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Ccdc180J3QNE4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc180J3QNE4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Gm4535-201ENSMUST00000182274 558 ntBASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Gm10355-201ENSMUST00000097146 517 ntBASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc180J3QNE4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc180J3QNE4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc180J3QNE4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms