Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Gm44357-201ENSMUST00000195897 142 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm19658-201ENSMUST00000196231 138 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm44367-201ENSMUST00000196836 138 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm44350-201ENSMUST00000197197 138 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm44390-201ENSMUST00000197533 144 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm44313-201ENSMUST00000198018 138 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm44486-201ENSMUST00000198508 138 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm44314-201ENSMUST00000199263 138 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm44394-201ENSMUST00000199558 138 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm44484-201ENSMUST00000199873 138 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm44466-201ENSMUST00000200264 138 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm44359-201ENSMUST00000200671 138 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3tc1G3X9F6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3tc1G3X9F6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Gm7862-201ENSMUST00000121461 292 ntBASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Gm6296-201ENSMUST00000222599 943 ntBASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sh3tc1G3X9F6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc1G3X9F6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc1G3X9F6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc1G3X9F6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc1G3X9F6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc1G3X9F6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc1G3X9F6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc1G3X9F6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.28■□□□□ 0.84
Sh3tc1G3X9F6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc1G3X9F6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh3tc1G3X9F6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Gm8969-201ENSMUST00000199694 526 ntBASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh3tc1G3X9F6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh3tc1G3X9F6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh3tc1G3X9F6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.27■□□□□ 0.83
Sh3tc1G3X9F6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh3tc1G3X9F6 Mir5131-201ENSMUST00000175426 93 ntBASIC20.27■□□□□ 0.83
Sh3tc1G3X9F6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Sh3tc1G3X9F6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.27■□□□□ 0.83
Sh3tc1G3X9F6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.27■□□□□ 0.83
Sh3tc1G3X9F6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh3tc1G3X9F6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Sh3tc1G3X9F6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.26■□□□□ 0.83
Sh3tc1G3X9F6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh3tc1G3X9F6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms