Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx1-1G3UXB3 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Nkx1-1G3UXB3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Gm14659-201ENSMUST00000117667 843 ntBASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Gm37604-201ENSMUST00000191749 1272 ntBASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Gm38114-201ENSMUST00000191877 1232 ntBASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx1-1G3UXB3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Gm37533-201ENSMUST00000193848 545 ntBASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx1-1G3UXB3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nkx1-1G3UXB3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Gm17271-201ENSMUST00000165535 355 ntBASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx1-1G3UXB3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Gm11780-201ENSMUST00000136880 516 ntBASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms