Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Gm24513-201ENSMUST00000174964 138 ntBASIC20.17■□□□□ 0.82
NpcdF8VQB8 Auts2-212ENSMUST00000178555 309 ntBASIC20.17■□□□□ 0.82
NpcdF8VQB8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.17■□□□□ 0.82
NpcdF8VQB8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NpcdF8VQB8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NpcdF8VQB8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Gm27397-201ENSMUST00000184997 107 ntBASIC20.16■□□□□ 0.82
NpcdF8VQB8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NpcdF8VQB8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Gm13186-201ENSMUST00000118031 316 ntBASIC20.15■□□□□ 0.82
NpcdF8VQB8 Gm15165-201ENSMUST00000118140 502 ntBASIC20.15■□□□□ 0.82
NpcdF8VQB8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.15■□□□□ 0.82
NpcdF8VQB8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NpcdF8VQB8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NpcdF8VQB8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.14■□□□□ 0.82
NpcdF8VQB8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NpcdF8VQB8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NpcdF8VQB8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NpcdF8VQB8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NpcdF8VQB8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.14■□□□□ 0.81
NpcdF8VQB8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NpcdF8VQB8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NpcdF8VQB8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.14■□□□□ 0.81
NpcdF8VQB8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.14■□□□□ 0.81
NpcdF8VQB8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.14■□□□□ 0.81
NpcdF8VQB8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NpcdF8VQB8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.14■□□□□ 0.81
NpcdF8VQB8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms