Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Pcdh9F8VPK8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh9F8VPK8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Gm7638-201ENSMUST00000121348 967 ntBASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Il3ra-202ENSMUST00000223589 738 ntBASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Gm10812-201ENSMUST00000099864 546 ntBASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh9F8VPK8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Gm12085-201ENSMUST00000119263 940 ntBASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Gm38027-201ENSMUST00000192315 235 ntBASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh9F8VPK8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh9F8VPK8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdh9F8VPK8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh9F8VPK8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms