Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh11xF6ZNL5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh11xF6ZNL5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Gm7889-201ENSMUST00000185591 958 ntBASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh11xF6ZNL5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Pcdh11xF6ZNL5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Gm7370-201ENSMUST00000219471 767 ntBASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdh11xF6ZNL5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh11xF6ZNL5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh11xF6ZNL5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh11xF6ZNL5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms