Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm23689-201ENSMUST00000180354 110 ntBASIC9.43□□□□□ -0.9
Herc1E9PZP8 Gm27359-201ENSMUST00000184153 110 ntBASIC9.43□□□□□ -0.9
Herc1E9PZP8 Gm27785-201ENSMUST00000184268 110 ntBASIC9.43□□□□□ -0.9
Herc1E9PZP8 Gm27466-201ENSMUST00000184396 110 ntBASIC9.43□□□□□ -0.9
Herc1E9PZP8 Gm27703-201ENSMUST00000184836 110 ntBASIC9.43□□□□□ -0.9
Herc1E9PZP8 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.43□□□□□ -0.9
Herc1E9PZP8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Herc1E9PZP8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm13597-201ENSMUST00000121239 375 ntBASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm17150-201ENSMUST00000165577 381 ntBASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm27646-201ENSMUST00000183989 110 ntBASIC9.42□□□□□ -0.9
Herc1E9PZP8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC9.42□□□□□ -0.9
Herc1E9PZP8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm6266-201ENSMUST00000203844 806 ntBASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm44855-201ENSMUST00000205725 362 ntBASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Herc1E9PZP8 Gm44450-201ENSMUST00000199528 114 ntBASIC9.42□□□□□ -0.9
Herc1E9PZP8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Herc1E9PZP8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC9.41□□□□□ -0.9
Herc1E9PZP8 Gm6745-201ENSMUST00000199216 526 ntBASIC9.41□□□□□ -0.9
Herc1E9PZP8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Gm5837-201ENSMUST00000191844 1369 ntBASIC9.41□□□□□ -0.9
Herc1E9PZP8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Gm11478-201ENSMUST00000117851 599 ntBASIC9.41□□□□□ -0.9
Herc1E9PZP8 Gm38241-201ENSMUST00000192641 898 ntBASIC9.41□□□□□ -0.9
Herc1E9PZP8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Gm32051-202ENSMUST00000197905 2385 ntBASIC9.41□□□□□ -0.9
Herc1E9PZP8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Gm10253-201ENSMUST00000194270 940 ntBASIC9.41□□□□□ -0.9
Herc1E9PZP8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Herc1E9PZP8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.4□□□□□ -0.9
Herc1E9PZP8 AY702102-202ENSMUST00000194651 1173 ntBASIC9.4□□□□□ -0.9
Herc1E9PZP8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.4□□□□□ -0.9
Herc1E9PZP8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc1E9PZP8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms