Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh17E9PXF0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh17E9PXF0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh17E9PXF0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pcdh17E9PXF0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh17E9PXF0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Gm11950-201ENSMUST00000121615 838 ntBASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Gm37722-201ENSMUST00000193757 208 ntBASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh17E9PXF0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh17E9PXF0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh17E9PXF0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh17E9PXF0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms