Protein–RNA interactions for Protein: D3YUK0

Gm3259, Predicted gene 3259, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3259D3YUK0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3259D3YUK0 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.83■□□□□ 0.28
Gm3259D3YUK0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3259D3YUK0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Gm37055-201ENSMUST00000191866 133 ntBASIC16.82■□□□□ 0.28
Gm3259D3YUK0 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3259D3YUK0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3259D3YUK0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Gm30025-201ENSMUST00000218555 728 ntBASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3259D3YUK0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3259D3YUK0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Gm3259D3YUK0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm3259D3YUK0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms