Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn2B2RVW2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Rprl3-201ENSMUST00000157400 290 ntBASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Gm27525-201ENSMUST00000184465 107 ntBASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn2B2RVW2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Gm2651-201ENSMUST00000203560 838 ntBASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Gm18206-201ENSMUST00000207027 926 ntBASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Rps4l-201ENSMUST00000071745 943 ntBASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn2B2RVW2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Gm6296-201ENSMUST00000222599 943 ntBASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn2B2RVW2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn2B2RVW2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm15165-201ENSMUST00000118140 502 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44357-201ENSMUST00000195897 142 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm19658-201ENSMUST00000196231 138 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44367-201ENSMUST00000196836 138 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44350-201ENSMUST00000197197 138 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44390-201ENSMUST00000197533 144 ntBASIC19.4■□□□□ 0.7
Clrn2B2RVW2 Gm44313-201ENSMUST00000198018 138 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms