Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn7aB1AYL1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn7aB1AYL1 Gm10355-201ENSMUST00000097146 517 ntBASIC21.71■■□□□ 1.07
Scn7aB1AYL1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Scn7aB1AYL1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.71■■□□□ 1.07
Scn7aB1AYL1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn7aB1AYL1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Scn7aB1AYL1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Scn7aB1AYL1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn7aB1AYL1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Scn7aB1AYL1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.7■■□□□ 1.06
Scn7aB1AYL1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn7aB1AYL1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn7aB1AYL1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Gm4995-201ENSMUST00000117247 432 ntBASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Gm7862-201ENSMUST00000121461 292 ntBASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Gm6376-201ENSMUST00000209407 580 ntBASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn7aB1AYL1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn7aB1AYL1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn7aB1AYL1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn7aB1AYL1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn7aB1AYL1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC21.68■■□□□ 1.06
Scn7aB1AYL1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.68■■□□□ 1.06
Scn7aB1AYL1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn7aB1AYL1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Scn7aB1AYL1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn7aB1AYL1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn7aB1AYL1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn7aB1AYL1 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.67■■□□□ 1.06
Scn7aB1AYL1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC21.67■■□□□ 1.06
Scn7aB1AYL1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn7aB1AYL1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.67■■□□□ 1.06
Scn7aB1AYL1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn7aB1AYL1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Scn7aB1AYL1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Scn7aB1AYL1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn7aB1AYL1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn7aB1AYL1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Scn7aB1AYL1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Gm15173-201ENSMUST00000122049 433 ntBASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn7aB1AYL1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn7aB1AYL1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC21.64■■□□□ 1.05
Scn7aB1AYL1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn7aB1AYL1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Scn7aB1AYL1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC21.64■■□□□ 1.05
Scn7aB1AYL1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn7aB1AYL1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn7aB1AYL1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Scn7aB1AYL1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn7aB1AYL1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms