Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Shroom2A2ALU4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Shroom2A2ALU4 AC154572.2-201ENSMUST00000225105 997 ntBASIC26.54■■□□□ 1.84
Shroom2A2ALU4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom2A2ALU4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom2A2ALU4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Shroom2A2ALU4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC26.53■■□□□ 1.84
Shroom2A2ALU4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom2A2ALU4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom2A2ALU4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom2A2ALU4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom2A2ALU4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom2A2ALU4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Shroom2A2ALU4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Shroom2A2ALU4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Shroom2A2ALU4 Gm45612-201ENSMUST00000211320 160 ntBASIC26.52■■□□□ 1.84
Shroom2A2ALU4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Gm13823-201ENSMUST00000119930 345 ntBASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Shroom2A2ALU4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC26.5■■□□□ 1.83
Shroom2A2ALU4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC26.5■■□□□ 1.83
Shroom2A2ALU4 Gm5866-201ENSMUST00000177881 973 ntBASIC26.5■■□□□ 1.83
Shroom2A2ALU4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Shroom2A2ALU4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Shroom2A2ALU4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
Shroom2A2ALU4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC26.5■■□□□ 1.83
Shroom2A2ALU4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Shroom2A2ALU4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Gm44335-201ENSMUST00000196879 141 ntBASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Gm44297-201ENSMUST00000198304 141 ntBASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Gm44346-201ENSMUST00000198851 141 ntBASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Shroom2A2ALU4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Shroom2A2ALU4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC26.47■■□□□ 1.83
Shroom2A2ALU4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Shroom2A2ALU4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
Shroom2A2ALU4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Shroom2A2ALU4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Shroom2A2ALU4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Shroom2A2ALU4 AC125206.2-201ENSMUST00000217454 574 ntBASIC26.47■■□□□ 1.83
Shroom2A2ALU4 AC126408.1-201ENSMUST00000225184 523 ntBASIC26.47■■□□□ 1.83
Shroom2A2ALU4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Shroom2A2ALU4 Gm27622-201ENSMUST00000183779 60 ntBASIC26.46■■□□□ 1.83
Shroom2A2ALU4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Shroom2A2ALU4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Shroom2A2ALU4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC26.46■■□□□ 1.83
Shroom2A2ALU4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Shroom2A2ALU4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Shroom2A2ALU4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Shroom2A2ALU4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Shroom2A2ALU4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Gm5682-201ENSMUST00000173402 505 ntBASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC26.45■■□□□ 1.82
Shroom2A2ALU4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Shroom2A2ALU4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms