Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcna-ps2A0A140T8V5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Pcna-ps2A0A140T8V5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcna-ps2A0A140T8V5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcna-ps2A0A140T8V5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcna-ps2A0A140T8V5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Gm24841-201ENSMUST00000158676 357 ntBASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcna-ps2A0A140T8V5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcna-ps2A0A140T8V5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Timm23-208ENSMUST00000226683 750 ntBASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcna-ps2A0A140T8V5 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.86■□□□□ 0.29
Pcna-ps2A0A140T8V5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms