Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav23A0A0G2JG17 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav23A0A0G2JG17 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Gm43799-201ENSMUST00000201845 579 ntBASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav23A0A0G2JG17 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Mir8112-201ENSMUST00000184382 131 ntBASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav23A0A0G2JG17 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Gm11539-201ENSMUST00000119837 557 ntBASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Gm13436-201ENSMUST00000120418 567 ntBASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav23A0A0G2JG17 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav23A0A0G2JG17 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav23A0A0G2JG17 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav23A0A0G2JG17 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav23A0A0G2JG17 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav23A0A0G2JG17 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav23A0A0G2JG17 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms