Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Gm13559-201ENSMUST00000120476 863 ntBASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Gm43799-201ENSMUST00000201845 579 ntBASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-4A0A075B6B4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-4A0A075B6B4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-4A0A075B6B4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-4A0A075B6B4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-4A0A075B6B4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-4A0A075B6B4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-4A0A075B6B4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-4A0A075B6B4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-4A0A075B6B4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-4A0A075B6B4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Gm16061-201ENSMUST00000122167 857 ntBASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-4A0A075B6B4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6-4A0A075B6B4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Gm27000-201ENSMUST00000182943 842 ntBASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav6-4A0A075B6B4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav6-4A0A075B6B4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms