Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm18206-201ENSMUST00000207027 926 ntBASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav8n-2A0A075B633 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav8n-2A0A075B633 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Grk6-206ENSMUST00000224995 2971 ntBASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav8n-2A0A075B633 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Gm2651-201ENSMUST00000203560 838 ntBASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav8n-2A0A075B633 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Gm6376-201ENSMUST00000209407 580 ntBASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav8n-2A0A075B633 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms