Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Gm5417-201ENSMUST00000079706 384 ntBASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.86■□□□□ 0.29
H2afb2S4R1M3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.85■□□□□ 0.29
H2afb2S4R1M3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Gm13216-201ENSMUST00000117145 591 ntBASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
H2afb2S4R1M3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
H2afb2S4R1M3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
H2afb2S4R1M3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
H2afb2S4R1M3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb2S4R1M3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms