Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mrpl40Q9Z2Q5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mrpl40Q9Z2Q5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mrpl40Q9Z2Q5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Mrpl40Q9Z2Q5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mrpl40Q9Z2Q5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mrpl40Q9Z2Q5 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Gm10418-201ENSMUST00000100943 576 ntBASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Gm10013-201ENSMUST00000106074 672 ntBASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Gm13401-201ENSMUST00000117074 291 ntBASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Gm23634-201ENSMUST00000175071 91 ntBASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Gm10819-201ENSMUST00000099988 561 ntBASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Mrpl40Q9Z2Q5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.84■□□□□ 0.29
Mrpl40Q9Z2Q5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Mrpl40Q9Z2Q5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Mrpl40Q9Z2Q5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mrpl40Q9Z2Q5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Gm29791-202ENSMUST00000207888 369 ntBASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mrpl40Q9Z2Q5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Mrpl40Q9Z2Q5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms