Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm43799-201ENSMUST00000201845 579 ntBASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Atp6ap1Q9R1Q9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Atp6ap1Q9R1Q9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Atp6ap1Q9R1Q9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.48■□□□□ 0.23
Atp6ap1Q9R1Q9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Atp6ap1Q9R1Q9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm13474-201ENSMUST00000122466 815 ntBASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atp6ap1Q9R1Q9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Atp6ap1Q9R1Q9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Atp6ap1Q9R1Q9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atp6ap1Q9R1Q9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Atp6ap1Q9R1Q9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atp6ap1Q9R1Q9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.45■□□□□ 0.22
Atp6ap1Q9R1Q9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.45■□□□□ 0.22
Atp6ap1Q9R1Q9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms