Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cdh17Q9R100 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh17Q9R100 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh17Q9R100 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh17Q9R100 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh17Q9R100 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh17Q9R100 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh17Q9R100 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Il3ra-202ENSMUST00000223589 738 ntBASIC16.43■□□□□ 0.22
Cdh17Q9R100 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdh17Q9R100 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh17Q9R100 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Gm10653-202ENSMUST00000139570 835 ntBASIC16.42■□□□□ 0.22
Cdh17Q9R100 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.42■□□□□ 0.22
Cdh17Q9R100 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Cdh17Q9R100 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh17Q9R100 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh17Q9R100 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.4■□□□□ 0.22
Cdh17Q9R100 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh17Q9R100 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdh17Q9R100 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.39■□□□□ 0.21
Cdh17Q9R100 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms