Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six6Q9QZ28 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.38□□□□□ -0.11
Six6Q9QZ28 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Six6Q9QZ28 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.37□□□□□ -0.11
Six6Q9QZ28 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.37□□□□□ -0.11
Six6Q9QZ28 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.37□□□□□ -0.11
Six6Q9QZ28 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Six6Q9QZ28 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.36□□□□□ -0.11
Six6Q9QZ28 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.36□□□□□ -0.11
Six6Q9QZ28 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Gm29791-202ENSMUST00000207888 369 ntBASIC14.36□□□□□ -0.11
Six6Q9QZ28 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.36□□□□□ -0.11
Six6Q9QZ28 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Six6Q9QZ28 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.35□□□□□ -0.11
Six6Q9QZ28 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Six6Q9QZ28 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Six6Q9QZ28 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Gm40848-201ENSMUST00000221998 324 ntBASIC14.34□□□□□ -0.11
Six6Q9QZ28 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Six6Q9QZ28 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms